Logo Search packages:      
Sourcecode: bedtools version File versions  Download package

Public Member Functions | Private Member Functions | Private Attributes

BedCoverage Class Reference

Collaboration diagram for BedCoverage:
Collaboration graph

List of all members.

Public Member Functions

 BedCoverage (string &bedAFile, string &bedBFile, bool forceStrand, bool writeHistogram, bool bamInput, bool obeySplits, bool eachBase)

Private Member Functions

void CollectCoverageBam (string bamFile)
void CollectCoverageBed ()
void ReportCoverage ()

Private Attributes

bool _bamInput
string _bedAFile
string _bedBFile
bool _eachBase
bool _forceStrand
bool _obeySplits
bool _writeHistogram

Detailed Description

Definition at line 34 of file coverageBed.h.

The documentation for this class was generated from the following files:

Generated by  Doxygen 1.6.0   Back to index