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Public Member Functions | Private Member Functions | Private Attributes

BedAnnotate Class Reference

Collaboration diagram for BedAnnotate:
Collaboration graph
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List of all members.

Public Member Functions

void AnnotateBed ()
 BedAnnotate (const string &mainFile, const vector< string > &annoFileNames, const vector< string > &annoTitles, bool forceStrand, bool reportCounts, bool reportBoth)

Private Member Functions

void CloseAnnoFiles ()
void InitializeMainFile ()
void OpenAnnoFiles ()
void PrintHeader ()
void ReportAnnotations ()

Private Attributes

vector< string > _annoFileNames
vector< BedFile * > _annoFiles
vector< string > _annoTitles
BedFile_bed
bool _forceStrand
string _mainFile
bool _reportBoth
bool _reportCounts

Detailed Description

Definition at line 34 of file annotateBed.h.


The documentation for this class was generated from the following files:

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