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BamTools::BamDefaultIndex Class Reference

Inheritance diagram for BamTools::BamDefaultIndex:
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List of all members.


struct  BamDefaultIndexPrivate

Public Member Functions

 BamDefaultIndex (BamTools::BgzfData *bgzf, BamTools::BamReader *reader, bool isBigEndian)
bool Build (void)
bool GetOffsets (const BamTools::BamRegion &region, const bool isRightBoundSpecified, std::vector< int64_t > &offsets)
virtual bool HasAlignments (const int &referenceID)
bool Load (const std::string &filename)
bool Write (const std::string &bamFilename)

Protected Attributes

bool m_isBigEndian
BamTools::RefVector m_references

Private Attributes


Detailed Description

Definition at line 59 of file BamIndex.h.

The documentation for this class was generated from the following files:

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